Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015811551.1_cds_XP_016496767.1_10955
CDS Infomation

[gene=LOC107815663] [db_xref=GeneID:107815663] [protein=pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like] [protein_id=XP_016496767.1] [location=complement(8872..10518)] [gbkey=CDS]
Sequence

ATGGCGATAAGAACTCTTCTTCGCGCCAGAATAAGTACTCACCATTTCCCCCTCACAATC
TTCCATCACAATCACATACCACCTACCAACACCAACATCTACAGCCATCAGTTCGCATCC
CTTTTGCACAAAACTAATTTCACTTCCAGTCCAGACGTCCCACCCTCTAATTCACACCTA
GTAATAAGTGAACTCTCTCGCATCCTAAGCGATTACAGAAATCCCCACAACGACATTGAA
TCAGCTCTCAATCCATTCTCCGACAAGATTTCGGCTAACATAGTTGAGCAAGTTCTTAAA
CGCTGCAAAAATCTTGGGTTTTCAGCTCACAGATTCTTCATTTGGGCAAATAAATTATCG
GGGTTTTATCATAGTAAAGAAAGCTATCACATTCTTGTTGATATTTTAGGAAGTAGCAAA
CAGTTTCCTTTGTTGTGGGACTTTCTTGTTGAGTTAAAAAGGAACAAATCTTGTGAATTA
GGTCAAGATATTTTCTGGCTTGTCTTTAGGTCTTCTAGTAGAGCTAATTTACCTGTTGAT
GCAATTAGGAGTTTTGATAAAATGATTGATTTTGGGATTACACCGAGTGTAGTGGATGTT
GATCAGCTTTTGCTTGCATTGTGTAAAAGAAAGCATATGAAAGAAGCCAAACAGTTCTTT
GATAGAGTTAAAGATGGGTACATGCTGAGTGTGAAATCTTACAGCATTATGATAAGGGGA
TGGGGAGAAATGGGAGAAGTAGTTGAGGCACAGAAACTGTTTGATGAAATGCTTGAGCGA
GGTTTTTCAGTTGATTTGTTAGCTTATAATAGCATTTTGGAGTCAGTGTGCAAGGCAGGA
AAAATGGACGAGGCCTATAACTTGTTCATGAAGATGAGGTCCATGGGATTAAGGCCTGAT
GCTTTTACGTATGCTGTTTTTATTCATGCTTATTGTGTAAAGGACGATATTCATGCAGCT
TTTAGGGTCCTTGATCGGATGAAAAGGTACAAGCTTGTGCCTAATGTATTTACGTACAAT
GTTATCATCAAGAAGCTTTGCAAGAGTGACAAGGTTGAGGATGCTTACCAACTGATAGAT
GAGATGATTGAACGAGGGGTAAAACCTGATTGTTGGAGTTATAATACAATCCTTGCTTGT
CATTGTGATCATAGCGAAGTCAATTTGGCACTTAGGCTGATCTCAAGAATGGAGAAGAAC
GGTAGCCTGCCAGATCGTCATACATATAACATGGTGCTTAAAATGCTCATAAAGGTCGGA
AGGTTTGATAGAGTTGAGAAAGTATGGGAGAGTATGGAAGGCAGGAAATTTTATCCTTCA
GTCTCAACATATGCTGTTATGATACATGGTCTCTGTCAGAAGAAAGGCAAACTTGAGGAA
GCATGTAGATATTTTGAAATGATGATAGATGAAGGGATCCCGCCATATGGTGAAACCTGT
GAATTATTGCGGAATAGACTTATAGGTTTAGGATTTGCAGAGCAAAAAGATATTCTTGCG
GATAAGATGGAAAGAAGTACTTCTTGTTTAATTCAAGAGCTAACAAACATAATGAGAGGA
AACAAGGCCCGTGCCAGATTGAGACGTGAAGAAGAAACTCTGATAGTGATGAGTAAAAGA
GTTCAATGTGCCGGAGAAGTAGAATAG

Peptide Sequence

PEP ID

XP_016496767.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like [Nicotiana tabacum]
Sequence

MAIRTLLRARISTHHFPLTIFHHNHIPPTNTNIYSHQFASLLHKTNFTSSPDVPPSNSHL
VISELSRILSDYRNPHNDIESALNPFSDKISANIVEQVLKRCKNLGFSAHRFFIWANKLS
GFYHSKESYHILVDILGSSKQFPLLWDFLVELKRNKSCELGQDIFWLVFRSSSRANLPVD
AIRSFDKMIDFGITPSVVDVDQLLLALCKRKHMKEAKQFFDRVKDGYMLSVKSYSIMIRG
WGEMGEVVEAQKLFDEMLERGFSVDLLAYNSILESVCKAGKMDEAYNLFMKMRSMGLRPD
AFTYAVFIHAYCVKDDIHAAFRVLDRMKRYKLVPNVFTYNVIIKKLCKSDKVEDAYQLID
EMIERGVKPDCWSYNTILACHCDHSEVNLALRLISRMEKNGSLPDRHTYNMVLKMLIKVG
RFDRVEKVWESMEGRKFYPSVSTYAVMIHGLCQKKGKLEEACRYFEMMIDEGIPPYGETC
ELLRNRLIGLGFAEQKDILADKMERSTSCLIQELTNIMRGNKARARLRREEETLIVMSKR
VQCAGEVE

Transcript Sequence

Gene sequence data has not been registered.